Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC125807.1-201ENST00000483097 614 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC069120.2-201ENST00000524091 540 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC044860.1-202ENST00000559481 777 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 SNHG9-202ENST00000564014 471 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC092337.1-201ENST00000568699 1129 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 Z92544.3-201ENST00000624747 417 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 TUBB3P1-201ENST00000405796 1332 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AP001267.2-201ENST00000532619 2086 ntBASIC11.06□□□□□ -0.64
C9orf85Q96MD7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 TPT1P11-201ENST00000458482 498 ntBASIC11.06□□□□□ -0.64
C9orf85Q96MD7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 GAPDHP40-201ENST00000505218 1006 ntBASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 TIMM17BP1-201ENST00000545713 516 ntBASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AC015911.4-201ENST00000588022 1070 ntBASIC11.06□□□□□ -0.64
C9orf85Q96MD7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.06□□□□□ -0.64
C9orf85Q96MD7 AL844908.2-201ENST00000609461 460 ntBASIC11.06□□□□□ -0.64
C9orf85Q96MD7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms