Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 AL359258.3-201ENST00000622910 2331 ntBASIC17.53■□□□□ 0.4
CDCA5Q96FF9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDCA5Q96FF9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 BANF1P3-201ENST00000412556 261 ntBASIC17.52■□□□□ 0.4
CDCA5Q96FF9 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 DUTP3-201ENST00000450025 415 ntBASIC17.52■□□□□ 0.4
CDCA5Q96FF9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 AC084781.1-201ENST00000613737 656 ntBASIC17.52■□□□□ 0.4
CDCA5Q96FF9 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 AC133540.1-201ENST00000620845 1019 ntBASIC17.52■□□□□ 0.4
CDCA5Q96FF9 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 AC138466.4-201ENST00000623965 852 ntBASIC17.52■□□□□ 0.4
CDCA5Q96FF9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA5Q96FF9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA5Q96FF9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 RPSAP15-201ENST00000448168 861 ntBASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 ALG1L6P-201ENST00000515248 758 ntBASIC17.51■□□□□ 0.39
CDCA5Q96FF9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 MIR3188-201ENST00000583494 85 ntBASIC17.51■□□□□ 0.39
CDCA5Q96FF9 AC007326.1-201ENST00000604539 458 ntBASIC17.51■□□□□ 0.39
CDCA5Q96FF9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA5Q96FF9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 AC003102.2-201ENST00000589195 1469 ntBASIC17.5■□□□□ 0.39
CDCA5Q96FF9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms