Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.75□□□□□ -0.21
PTP4A1Q93096 SERBP1P3-201ENST00000459980 809 ntBASIC13.75□□□□□ -0.21
PTP4A1Q93096 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 AC140878.1-201ENST00000565277 250 ntBASIC13.75□□□□□ -0.21
PTP4A1Q93096 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 AC007787.1-201ENST00000588095 1583 ntBASIC13.75□□□□□ -0.21
PTP4A1Q93096 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC107890.1-201ENST00000422478 521 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC125807.1-201ENST00000483097 614 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC069120.2-201ENST00000524091 540 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC051619.7-201ENST00000568314 623 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AL161772.1-201ENST00000610494 4412 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 HSPA7-201ENST00000445535 1927 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC138969.3-201ENST00000546612 1459 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC138932.2-201ENST00000548268 1459 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 AC126755.4-201ENST00000549796 1459 ntBASIC13.74□□□□□ -0.21
PTP4A1Q93096 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTP4A1Q93096 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTP4A1Q93096 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTP4A1Q93096 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTP4A1Q93096 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTP4A1Q93096 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.73□□□□□ -0.21
PTP4A1Q93096 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTP4A1Q93096 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms