Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 AC019193.1-201ENST00000506678 823 ntBASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 YRDCP1-201ENST00000621419 643 ntBASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 MRPL37P1-201ENST00000592451 1337 ntBASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASKIN1Q8WXD9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 HNRNPA1P27-201ENST00000412087 955 ntBASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CASKIN1Q8WXD9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 MIR3677-201ENST00000578964 60 ntBASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 AC092135.3-201ENST00000624151 1846 ntBASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASKIN1Q8WXD9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 OR2K2-202ENST00000374428 1038 ntBASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms