Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PIK3C3Q8NEB9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
PIK3C3Q8NEB9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 AC084364.1-201ENST00000551967 1556 ntBASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 AC023141.5-201ENST00000458585 616 ntBASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 MTHFR-210ENST00000641407 2387 ntBASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 AL928921.2-201ENST00000641325 2442 ntBASIC14.39□□□□□ -0.11
PIK3C3Q8NEB9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 AL691403.2-201ENST00000618460 490 ntBASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 AC009093.7-201ENST00000623853 1223 ntBASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 PTENP1-202ENST00000532280 3996 ntBASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms