Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC055876.3-201ENST00000431496 288 ntBASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC004890.2-204ENST00000481968 304 ntBASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 GAPDHP40-201ENST00000505218 1006 ntBASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC138649.4-201ENST00000612222 287 ntBASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 BTBD7P1-201ENST00000447253 1453 ntBASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC83Q8IWF9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AL390955.2-201ENST00000603032 514 ntBASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC093512.1-201ENST00000617969 520 ntBASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AL360270.3-201ENST00000609118 1348 ntBASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC83Q8IWF9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AC022144.1-201ENST00000602255 1580 ntBASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AC004066.1-201ENST00000502488 802 ntBASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AC104794.3-201ENST00000566840 1248 ntBASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 AP001267.2-201ENST00000532619 2086 ntBASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 OR2I1P-210ENST00000642037 4691 ntBASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms