Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC007969.1-201ENST00000433675 447 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 MTX1P1-201ENST00000440904 838 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC005695.3-201ENST00000614522 232 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 GPR182-203ENST00000622922 591 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 KRT8P4-201ENST00000509735 1454 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC015818.8-201ENST00000587907 1519 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 AC091951.1-201ENST00000512854 2465 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AL109954.1-202ENST00000564051 2148 ntBASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AL591846.1-201ENST00000451736 433 ntBASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 PFN1P12-201ENST00000455938 534 ntBASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AC022494.1-201ENST00000466044 728 ntBASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 PKD1P5-201ENST00000532415 10291 ntBASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC60Q8IWA6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms