Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CRLF3Q8IUI8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CRLF3Q8IUI8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CRLF3Q8IUI8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CRLF3Q8IUI8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CRLF3Q8IUI8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 MTHFR-210ENST00000641407 2387 ntBASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 MIR770-201ENST00000390219 98 ntBASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AC136604.1-201ENST00000418535 575 ntBASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AC026150.2-201ENST00000564693 1156 ntBASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CRLF3Q8IUI8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 MIR346-201ENST00000362234 95 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 FAM220BP-201ENST00000377689 816 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 SPDYE14P-201ENST00000442619 822 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 CNN2P2-201ENST00000443536 909 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 CNN2P3-201ENST00000450201 906 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AC067863.1-201ENST00000494933 530 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AC069262.1-201ENST00000539058 672 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AL512356.2-201ENST00000546955 174 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AC015911.4-201ENST00000588022 1070 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AC026979.3-201ENST00000607315 403 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 AL136317.3-201ENST00000618497 906 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 HSPA7-201ENST00000445535 1927 ntBASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRLF3Q8IUI8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.31■□□□□ 0.04
CRLF3Q8IUI8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CRLF3Q8IUI8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CRLF3Q8IUI8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CRLF3Q8IUI8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CRLF3Q8IUI8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.31■□□□□ 0.04
CRLF3Q8IUI8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms