Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 TPT1P11-201ENST00000458482 498 ntBASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 MBLAC2-202ENST00000514906 1936 ntBASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 Z97205.2-201ENST00000564697 1639 ntBASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 AC005252.3-201ENST00000623855 2258 ntBASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 ACTG1P14-201ENST00000446382 1122 ntBASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 SLC25A1P1-201ENST00000528351 927 ntBASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 RN7SL828P-201ENST00000607615 303 ntBASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRTM1Q86UE6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 AC055811.4-201ENST00000624039 1754 ntBASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms