Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 BX088702.1-201ENST00000610784 235 ntBASIC15.31■□□□□ 0.04
DENND4AQ7Z401 MIR6858-201ENST00000620733 67 ntBASIC15.31■□□□□ 0.04
DENND4AQ7Z401 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.31■□□□□ 0.04
DENND4AQ7Z401 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AC005041.3-201ENST00000606287 649 ntBASIC15.31■□□□□ 0.04
DENND4AQ7Z401 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.31■□□□□ 0.04
DENND4AQ7Z401 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 AC012362.1-201ENST00000434906 739 ntBASIC15.3■□□□□ 0.04
DENND4AQ7Z401 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 AC131206.1-201ENST00000538078 1211 ntBASIC15.3■□□□□ 0.04
DENND4AQ7Z401 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.3■□□□□ 0.04
DENND4AQ7Z401 AC092850.2-201ENST00000623821 2697 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 MIR5196-201ENST00000578146 115 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC105137.3-201ENST00000617588 984 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AL132780.4-201ENST00000624870 1135 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC087481.3-201ENST00000602886 1894 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms