Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTR9Q6PD62 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTR9Q6PD62 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.08■□□□□ 0.49
CTR9Q6PD62 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CTR9Q6PD62 AC104640.1-201ENST00000562617 2109 ntBASIC18.08■□□□□ 0.49
CTR9Q6PD62 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTR9Q6PD62 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTR9Q6PD62 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.08■□□□□ 0.49
CTR9Q6PD62 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTR9Q6PD62 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTR9Q6PD62 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTR9Q6PD62 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CTR9Q6PD62 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 FLJ16779-201ENST00000612722 7638 ntBASIC18.08■□□□□ 0.48
CTR9Q6PD62 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AC138951.2-201ENST00000623455 1161 ntBASIC18.08■□□□□ 0.48
CTR9Q6PD62 AC008687.7-202ENST00000637404 953 ntBASIC18.08■□□□□ 0.48
CTR9Q6PD62 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTR9Q6PD62 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.08■□□□□ 0.48
CTR9Q6PD62 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 AC068587.6-202ENST00000641839 5619 ntBASIC18.07■□□□□ 0.48
CTR9Q6PD62 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 AC079316.1-201ENST00000548397 411 ntBASIC18.07■□□□□ 0.48
CTR9Q6PD62 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 AC004466.1-201ENST00000599515 1080 ntBASIC18.07■□□□□ 0.48
CTR9Q6PD62 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 ENPP7P14-201ENST00000621765 1040 ntBASIC18.07■□□□□ 0.48
CTR9Q6PD62 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.07■□□□□ 0.48
CTR9Q6PD62 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 AC055811.4-201ENST00000624039 1754 ntBASIC18.07■□□□□ 0.48
CTR9Q6PD62 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTR9Q6PD62 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 MROH4P-201ENST00000431302 1578 ntBASIC18.06■□□□□ 0.48
CTR9Q6PD62 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms