Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFRKBQ6P4R8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFRKBQ6P4R8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NFRKBQ6P4R8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NFRKBQ6P4R8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFRKBQ6P4R8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NFRKBQ6P4R8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 BTBD6P1-201ENST00000412176 1267 ntBASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AC006453.4-201ENST00000636949 1252 ntBASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 AC138035.3-201ENST00000622706 2791 ntBASIC17.21■□□□□ 0.35
NFRKBQ6P4R8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFRKBQ6P4R8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.21■□□□□ 0.34
NFRKBQ6P4R8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NFRKBQ6P4R8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TMBIM7P-203ENST00000641617 1718 ntBASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFRKBQ6P4R8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFRKBQ6P4R8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms