Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST2H2BCQ6DN03 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.83□□□□□ -0.35
HIST2H2BCQ6DN03 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
HIST2H2BCQ6DN03 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
HIST2H2BCQ6DN03 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.83□□□□□ -0.35
HIST2H2BCQ6DN03 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 PTGER4P2-201ENST00000328411 252 ntBASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 PTGER4P3-201ENST00000458150 252 ntBASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AC006529.1-201ENST00000459978 637 ntBASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AC009884.2-201ENST00000603110 324 ntBASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AP000322.3-201ENST00000608665 388 ntBASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AL157414.3-201ENST00000624276 1954 ntBASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST2H2BCQ6DN03 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AC092171.3-201ENST00000610122 2651 ntBASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AC106047.2-201ENST00000511723 743 ntBASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 GOLGA2P7-209ENST00000560408 745 ntBASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AC002044.2-201ENST00000624910 970 ntBASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms