Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 MIR6769A-201ENST00000617340 73 ntBASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 IL9RP3-201ENST00000442856 1674 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AC097065.1-201ENST00000425737 517 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AL512306.1-201ENST00000432698 848 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AC092580.1-201ENST00000433998 658 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 CD164-210ENST00000512821 964 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AC114947.1-202ENST00000514136 344 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AC093752.3-201ENST00000567343 901 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 AC105137.3-201ENST00000617588 984 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 DOC2GP-204ENST00000639052 2548 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 LTB4R2-202ENST00000528054 3092 ntBASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPAQ5VT25 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 AC103810.10-201ENST00000606504 343 ntBASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 GSN-206ENST00000394353 2311 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC22.37■■□□□ 1.17
CDC42BPAQ5VT25 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 SSR4P1-203ENST00000599569 2260 ntBASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 AC092135.3-201ENST00000624151 1846 ntBASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CES3-203ENST00000543856 3178 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 RPL7P35-201ENST00000446943 740 ntBASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 SIGLEC18P-201ENST00000602271 909 ntBASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPAQ5VT25 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms