Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 AL009178.2-201ENST00000597278 2719 ntBASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 RN7SL774P-201ENST00000577467 290 ntBASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 AC079336.7-201ENST00000623428 1078 ntBASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 SSR4P1-203ENST00000599569 2260 ntBASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.27■□□□□ 0.2
CTC1Q2NKJ3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 PRAL-201ENST00000624952 3286 ntBASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTC1Q2NKJ3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 AC069224.1-201ENST00000566372 1715 ntBASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 RNU1-114P-201ENST00000365297 166 ntBASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTC1Q2NKJ3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms