Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 AL591846.1-201ENST00000451736 433 ntBASIC18.28■□□□□ 0.52
RFX7Q2KHR2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 AC026434.2-201ENST00000506094 1078 ntBASIC18.28■□□□□ 0.52
RFX7Q2KHR2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.28■□□□□ 0.52
RFX7Q2KHR2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 AL139099.5-201ENST00000635274 300 ntBASIC18.28■□□□□ 0.52
RFX7Q2KHR2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX7Q2KHR2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 RPSAP36-202ENST00000494591 1261 ntBASIC18.27■□□□□ 0.51
RFX7Q2KHR2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX7Q2KHR2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 MTX1P1-201ENST00000440904 838 ntBASIC18.26■□□□□ 0.51
RFX7Q2KHR2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms