Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 AL109954.1-202ENST00000564051 2148 ntBASIC18.07■□□□□ 0.48
PDS5AQ29RF7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 BCYRN1-201ENST00000418539 200 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 AC016700.1-201ENST00000429424 312 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 AC044849.1-201ENST00000519737 1188 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 AL451050.2-201ENST00000606967 682 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 AP000346.4-201ENST00000614827 381 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 AC138649.2-201ENST00000615886 705 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 ZBED1P1-201ENST00000502364 1930 ntBASIC18.06■□□□□ 0.48
PDS5AQ29RF7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDS5AQ29RF7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 DPM3-202ENST00000368399 517 ntBASIC18.05■□□□□ 0.48
PDS5AQ29RF7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 SALL4P5-201ENST00000419001 1760 ntBASIC18.05■□□□□ 0.48
PDS5AQ29RF7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDS5AQ29RF7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 NKAIN1P1-201ENST00000435754 582 ntBASIC18.04■□□□□ 0.48
PDS5AQ29RF7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms