Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD3P84022 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD3P84022 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD3P84022 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD3P84022 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SMAD3P84022 LINC02447-202ENST00000501888 2146 ntBASIC16.31■□□□□ 0.2
SMAD3P84022 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD3P84022 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 AL158070.2-201ENST00000623713 1621 ntBASIC16.31■□□□□ 0.2
SMAD3P84022 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD3P84022 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD3P84022 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD3P84022 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SMAD3P84022 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD3P84022 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD3P84022 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD3P84022 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMAD3P84022 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD3P84022 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD3P84022 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD3P84022 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 C2orf69P1-201ENST00000563532 1093 ntBASIC16.31■□□□□ 0.2
SMAD3P84022 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
SMAD3P84022 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD3P84022 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD3P84022 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD3P84022 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD3P84022 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD3P84022 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMAD3P84022 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD3P84022 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 OR2K2-202ENST00000374428 1038 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD3P84022 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.3■□□□□ 0.2
SMAD3P84022 HLA-J-204ENST00000495278 958 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 MESTP3-201ENST00000503460 968 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD3P84022 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SMAD3P84022 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 DNM1P51-201ENST00000558149 522 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 AC026803.1-201ENST00000569130 274 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 MIR4313-201ENST00000580760 101 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 AC005632.3-201ENST00000605544 308 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD3P84022 AC007718.1-201ENST00000621078 280 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD3P84022 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 AP003680.1-201ENST00000598970 3660 ntBASIC16.3■□□□□ 0.2
SMAD3P84022 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD3P84022 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SMAD3P84022 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD3P84022 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD3P84022 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD3P84022 CYP2T1P-202ENST00000641596 2535 ntBASIC16.29■□□□□ 0.2
SMAD3P84022 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD3P84022 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMAD3P84022 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 CLUHP2-201ENST00000426660 1303 ntBASIC16.29■□□□□ 0.2
SMAD3P84022 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD3P84022 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms