Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
UBE2D3P61077 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 RPSAP43-201ENST00000402237 625 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 AC211486.1-202ENST00000416371 468 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 BX842568.4-201ENST00000421222 227 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 AC112482.1-201ENST00000492080 688 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 AC211476.1-201ENST00000503899 468 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2D3P61077 AC015910.1-201ENST00000579400 975 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
UBE2D3P61077 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2D3P61077 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2D3P61077 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 CICP11-201ENST00000434745 2827 ntBASIC10.93□□□□□ -0.66
UBE2D3P61077 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 Z97205.2-201ENST00000564697 1639 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AL080243.2-201ENST00000418783 582 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 UPF3AP3-201ENST00000420996 769 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 FAM8A3P-201ENST00000427218 844 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 GHSR-202ENST00000427970 912 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.92□□□□□ -0.66
UBE2D3P61077 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.92□□□□□ -0.66
UBE2D3P61077 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AL512356.2-201ENST00000546955 174 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 CBFB-203ENST00000561924 584 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 AC011467.4-201ENST00000594891 528 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 AL033527.5-202ENST00000641632 1098 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms