Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.81□□□□□ -0.68
CKS1BP61024 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.81□□□□□ -0.68
CKS1BP61024 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.81□□□□□ -0.68
CKS1BP61024 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 REXO1L6P-202ENST00000619970 1078 ntBASIC10.81□□□□□ -0.68
CKS1BP61024 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 AC136621.1-201ENST00000624017 2304 ntBASIC10.81□□□□□ -0.68
CKS1BP61024 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CKS1BP61024 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 POR-201ENST00000394893 2532 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CKS1BP61024 RNU1-129P-201ENST00000384064 167 ntBASIC10.8□□□□□ -0.68
CKS1BP61024 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS1BP61024 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS1BP61024 HCG4P8-203ENST00000443049 980 ntBASIC10.8□□□□□ -0.68
CKS1BP61024 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS1BP61024 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 U1.21-201ENST00000580816 167 ntBASIC10.8□□□□□ -0.68
CKS1BP61024 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS1BP61024 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 AL645728.2-201ENST00000641974 660 ntBASIC10.8□□□□□ -0.68
CKS1BP61024 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 PCDHA5-203ENST00000614258 4248 ntBASIC10.8□□□□□ -0.68
CKS1BP61024 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS1BP61024 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS1BP61024 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS1BP61024 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS1BP61024 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS1BP61024 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS1BP61024 AC102953.2-201ENST00000609755 3026 ntBASIC10.79□□□□□ -0.68
CKS1BP61024 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS1BP61024 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS1BP61024 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.79□□□□□ -0.68
CKS1BP61024 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS1BP61024 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms