Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.78■□□□□ 0.44
RHBDL3P58872 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RHBDL3P58872 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RHBDL3P58872 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 ACTG1P2-201ENST00000415776 1125 ntBASIC17.78■□□□□ 0.44
RHBDL3P58872 ACTG1P11-201ENST00000425411 1125 ntBASIC17.78■□□□□ 0.44
RHBDL3P58872 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.78■□□□□ 0.44
RHBDL3P58872 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RHBDL3P58872 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 SALL4P5-201ENST00000419001 1760 ntBASIC17.78■□□□□ 0.44
RHBDL3P58872 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
RHBDL3P58872 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHBDL3P58872 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.78■□□□□ 0.44
RHBDL3P58872 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.77■□□□□ 0.44
RHBDL3P58872 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RHBDL3P58872 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RHBDL3P58872 HLA-J-204ENST00000495278 958 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 AC106794.1-201ENST00000506935 792 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 GCOM2-201ENST00000509133 1104 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 AL160314.3-201ENST00000556041 767 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 SNORD3B-2-202ENST00000571722 791 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 AC090164.2-201ENST00000611487 516 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 AP001505.2-201ENST00000616815 443 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.77■□□□□ 0.44
RHBDL3P58872 Z98259.2-201ENST00000641583 609 ntBASIC17.77■□□□□ 0.44
RHBDL3P58872 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.77■□□□□ 0.44
RHBDL3P58872 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.77■□□□□ 0.44
RHBDL3P58872 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHBDL3P58872 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RHBDL3P58872 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.77■□□□□ 0.43
RHBDL3P58872 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RHBDL3P58872 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.77■□□□□ 0.43
RHBDL3P58872 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RHBDL3P58872 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.77■□□□□ 0.43
RHBDL3P58872 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RHBDL3P58872 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.77■□□□□ 0.43
RHBDL3P58872 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RHBDL3P58872 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.76■□□□□ 0.43
RHBDL3P58872 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 HYMAI-201ENST00000635591 3347 ntBASIC17.76■□□□□ 0.43
RHBDL3P58872 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.76■□□□□ 0.43
RHBDL3P58872 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RHBDL3P58872 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.76■□□□□ 0.43
RHBDL3P58872 PUDPP3-201ENST00000445368 636 ntBASIC17.76■□□□□ 0.43
RHBDL3P58872 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms