Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 ACE3P-201ENST00000423435 1973 ntBASIC13.34□□□□□ -0.27
FOXG1P55316 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 LILRP1-201ENST00000444199 1370 ntBASIC13.34□□□□□ -0.27
FOXG1P55316 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
FOXG1P55316 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 RPL7P3-201ENST00000441388 714 ntBASIC13.34□□□□□ -0.27
FOXG1P55316 KLF2P4-201ENST00000451959 1225 ntBASIC13.34□□□□□ -0.27
FOXG1P55316 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
FOXG1P55316 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.34□□□□□ -0.27
FOXG1P55316 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.34□□□□□ -0.27
FOXG1P55316 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.34□□□□□ -0.27
FOXG1P55316 ECM1P1-201ENST00000604092 1279 ntBASIC13.34□□□□□ -0.27
FOXG1P55316 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXG1P55316 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXG1P55316 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXG1P55316 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.33□□□□□ -0.27
FOXG1P55316 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
FOXG1P55316 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.33□□□□□ -0.27
FOXG1P55316 WASH3P-207ENST00000560956 1394 ntBASIC13.33□□□□□ -0.27
FOXG1P55316 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
FOXG1P55316 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.33□□□□□ -0.27
FOXG1P55316 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.33□□□□□ -0.27
FOXG1P55316 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.33□□□□□ -0.27
FOXG1P55316 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
FOXG1P55316 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.33□□□□□ -0.28
FOXG1P55316 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
FOXG1P55316 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.33□□□□□ -0.28
FOXG1P55316 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.33□□□□□ -0.28
FOXG1P55316 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.33□□□□□ -0.28
FOXG1P55316 CNN2P8-201ENST00000421872 913 ntBASIC13.33□□□□□ -0.28
FOXG1P55316 AC026954.1-201ENST00000429771 1293 ntBASIC13.33□□□□□ -0.28
FOXG1P55316 C2orf27AP3-201ENST00000434123 579 ntBASIC13.33□□□□□ -0.28
FOXG1P55316 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
FOXG1P55316 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.33□□□□□ -0.28
FOXG1P55316 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.33□□□□□ -0.28
FOXG1P55316 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.33□□□□□ -0.28
FOXG1P55316 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
FOXG1P55316 AL354718.3-201ENST00000616414 581 ntBASIC13.33□□□□□ -0.28
FOXG1P55316 CR382287.1-201ENST00000623954 586 ntBASIC13.33□□□□□ -0.28
FOXG1P55316 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.33□□□□□ -0.28
FOXG1P55316 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
FOXG1P55316 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.33□□□□□ -0.28
FOXG1P55316 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.33□□□□□ -0.28
FOXG1P55316 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
FOXG1P55316 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FOXG1P55316 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms