Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 RN7SL769P-201ENST00000469386 295 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 IMP3P2-201ENST00000489760 475 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.18■□□□□ 0.34
EPHB4P54760 MIR3619-201ENST00000579667 83 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 LINC01144-201ENST00000626198 1710 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.18■□□□□ 0.34
EPHB4P54760 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
EPHB4P54760 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
EPHB4P54760 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.17■□□□□ 0.34
EPHB4P54760 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 SLED1-202ENST00000512051 380 ntBASIC17.17■□□□□ 0.34
EPHB4P54760 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.17■□□□□ 0.34
EPHB4P54760 AC243562.2-201ENST00000561247 970 ntBASIC17.17■□□□□ 0.34
EPHB4P54760 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.17■□□□□ 0.34
EPHB4P54760 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
EPHB4P54760 AL451050.2-201ENST00000606967 682 ntBASIC17.17■□□□□ 0.34
EPHB4P54760 AC097724.1-201ENST00000609581 426 ntBASIC17.17■□□□□ 0.34
EPHB4P54760 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 AC138627.1-207ENST00000641560 1006 ntBASIC17.17■□□□□ 0.34
EPHB4P54760 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
EPHB4P54760 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EPHB4P54760 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHB4P54760 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
EPHB4P54760 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.16■□□□□ 0.34
EPHB4P54760 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.16■□□□□ 0.34
EPHB4P54760 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.16■□□□□ 0.34
EPHB4P54760 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.16■□□□□ 0.34
EPHB4P54760 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.16■□□□□ 0.34
EPHB4P54760 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.16■□□□□ 0.34
EPHB4P54760 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
EPHB4P54760 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
EPHB4P54760 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
EPHB4P54760 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
EPHB4P54760 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
EPHB4P54760 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
EPHB4P54760 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.16■□□□□ 0.34
EPHB4P54760 MIR1202-201ENST00000408529 83 ntBASIC17.16■□□□□ 0.34
EPHB4P54760 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.16■□□□□ 0.34
EPHB4P54760 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHB4P54760 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms