Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
NUP98P52948 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NUP98P52948 NPM1P43-201ENST00000558669 786 ntBASIC18.53■□□□□ 0.56
NUP98P52948 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NUP98P52948 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUP98P52948 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.53■□□□□ 0.56
NUP98P52948 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.53■□□□□ 0.56
NUP98P52948 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.53■□□□□ 0.56
NUP98P52948 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.53■□□□□ 0.56
NUP98P52948 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.52■□□□□ 0.56
NUP98P52948 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.52■□□□□ 0.56
NUP98P52948 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NUP98P52948 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NUP98P52948 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.52■□□□□ 0.56
NUP98P52948 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.52■□□□□ 0.56
NUP98P52948 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.52■□□□□ 0.56
NUP98P52948 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.52■□□□□ 0.56
NUP98P52948 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUP98P52948 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.52■□□□□ 0.56
NUP98P52948 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.52■□□□□ 0.56
NUP98P52948 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.52■□□□□ 0.55
NUP98P52948 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NUP98P52948 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NUP98P52948 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NUP98P52948 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NUP98P52948 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
NUP98P52948 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.52■□□□□ 0.55
NUP98P52948 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NUP98P52948 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 AP000358.1-201ENST00000456260 156 ntBASIC18.51■□□□□ 0.55
NUP98P52948 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
NUP98P52948 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.51■□□□□ 0.55
NUP98P52948 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.51■□□□□ 0.55
NUP98P52948 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.51■□□□□ 0.55
NUP98P52948 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.51■□□□□ 0.55
NUP98P52948 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NUP98P52948 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NUP98P52948 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.51■□□□□ 0.55
NUP98P52948 AL162727.3-201ENST00000635661 2787 ntBASIC18.51■□□□□ 0.55
NUP98P52948 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.51■□□□□ 0.55
NUP98P52948 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.51■□□□□ 0.55
NUP98P52948 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NUP98P52948 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.51■□□□□ 0.55
NUP98P52948 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.51■□□□□ 0.55
NUP98P52948 PHBP15-201ENST00000574228 665 ntBASIC18.51■□□□□ 0.55
NUP98P52948 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.51■□□□□ 0.55
NUP98P52948 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.51■□□□□ 0.55
NUP98P52948 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUP98P52948 CICP23-201ENST00000605013 2741 ntBASIC18.5■□□□□ 0.55
NUP98P52948 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 DUTP3-201ENST00000450025 415 ntBASIC18.5■□□□□ 0.55
NUP98P52948 RN7SL258P-201ENST00000478664 300 ntBASIC18.5■□□□□ 0.55
NUP98P52948 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.5■□□□□ 0.55
NUP98P52948 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.5■□□□□ 0.55
NUP98P52948 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NUP98P52948 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NUP98P52948 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms