Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 AC069262.1-201ENST00000539058 672 ntBASIC13.9□□□□□ -0.18
HMGA2P52926 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.9□□□□□ -0.18
HMGA2P52926 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.9□□□□□ -0.18
HMGA2P52926 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 AL109936.8-201ENST00000641772 604 ntBASIC13.9□□□□□ -0.18
HMGA2P52926 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.9□□□□□ -0.19
HMGA2P52926 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.9□□□□□ -0.19
HMGA2P52926 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HMGA2P52926 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HMGA2P52926 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HMGA2P52926 AC016397.2-201ENST00000624848 1985 ntBASIC13.89□□□□□ -0.19
HMGA2P52926 AL137783.1-201ENST00000623494 1896 ntBASIC13.89□□□□□ -0.19
HMGA2P52926 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HMGA2P52926 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.89□□□□□ -0.19
HMGA2P52926 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGA2P52926 RN7SL618P-201ENST00000477850 296 ntBASIC13.89□□□□□ -0.19
HMGA2P52926 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGA2P52926 ZNF890P-202ENST00000530367 1156 ntBASIC13.89□□□□□ -0.19
HMGA2P52926 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGA2P52926 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGA2P52926 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 AC004461.2-201ENST00000629517 803 ntBASIC13.89□□□□□ -0.19
HMGA2P52926 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HMGA2P52926 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 AC090505.1-201ENST00000430515 1834 ntBASIC13.89□□□□□ -0.19
HMGA2P52926 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HMGA2P52926 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HMGA2P52926 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.89□□□□□ -0.19
HMGA2P52926 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGA2P52926 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGA2P52926 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
HMGA2P52926 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms