Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LHX2P50458 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.57□□□□□ -0.24
LHX2P50458 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.57□□□□□ -0.24
LHX2P50458 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.57□□□□□ -0.24
LHX2P50458 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LHX2P50458 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LHX2P50458 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 NFIC-211ENST00000641145 8399 ntBASIC13.56□□□□□ -0.24
LHX2P50458 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.56□□□□□ -0.24
LHX2P50458 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.56□□□□□ -0.24
LHX2P50458 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.56□□□□□ -0.24
LHX2P50458 C2orf69P2-201ENST00000562032 1123 ntBASIC13.56□□□□□ -0.24
LHX2P50458 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LHX2P50458 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.56□□□□□ -0.24
LHX2P50458 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 AC138466.3-201ENST00000619983 221 ntBASIC13.56□□□□□ -0.24
LHX2P50458 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LHX2P50458 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 AC013268.4-201ENST00000637413 2228 ntBASIC13.56□□□□□ -0.24
LHX2P50458 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LHX2P50458 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LHX2P50458 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.55□□□□□ -0.24
LHX2P50458 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LHX2P50458 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 MIR1908-201ENST00000410394 80 ntBASIC13.55□□□□□ -0.24
LHX2P50458 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.55□□□□□ -0.24
LHX2P50458 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 CNN2P10-201ENST00000443067 918 ntBASIC13.55□□□□□ -0.24
LHX2P50458 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.55□□□□□ -0.24
LHX2P50458 FTLP10-202ENST00000505798 471 ntBASIC13.55□□□□□ -0.24
LHX2P50458 AC092658.1-201ENST00000505836 891 ntBASIC13.55□□□□□ -0.24
LHX2P50458 AL391280.1-201ENST00000506969 1062 ntBASIC13.55□□□□□ -0.24
LHX2P50458 AP003171.2-201ENST00000528208 925 ntBASIC13.55□□□□□ -0.24
LHX2P50458 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 AC106820.3-201ENST00000561653 397 ntBASIC13.55□□□□□ -0.24
LHX2P50458 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 RN7SL560P-201ENST00000577943 264 ntBASIC13.55□□□□□ -0.24
LHX2P50458 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.55□□□□□ -0.24
LHX2P50458 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.55□□□□□ -0.24
LHX2P50458 OR10B1P-201ENST00000601666 907 ntBASIC13.55□□□□□ -0.24
LHX2P50458 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.55□□□□□ -0.24
LHX2P50458 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.55□□□□□ -0.24
LHX2P50458 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LHX2P50458 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms