Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.68□□□□□ -0.06
SLC6A12P48065 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC6A12P48065 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 AC018665.1-201ENST00000622927 1362 ntBASIC14.68□□□□□ -0.06
SLC6A12P48065 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC6A12P48065 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC6A12P48065 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC6A12P48065 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SLC6A12P48065 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 ACTBP8-201ENST00000403258 1108 ntBASIC14.67□□□□□ -0.06
SLC6A12P48065 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
SLC6A12P48065 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 AP001063.1-201ENST00000568332 529 ntBASIC14.67□□□□□ -0.06
SLC6A12P48065 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 CU634019.7-201ENST00000624153 1185 ntBASIC14.67□□□□□ -0.06
SLC6A12P48065 FP236241.2-201ENST00000624906 1185 ntBASIC14.67□□□□□ -0.06
SLC6A12P48065 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SLC6A12P48065 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 NORAD-201ENST00000565493 5339 ntBASIC14.67□□□□□ -0.06
SLC6A12P48065 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC6A12P48065 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC6A12P48065 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC6A12P48065 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SLC6A12P48065 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC6A12P48065 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC6A12P48065 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC6A12P48065 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.66□□□□□ -0.06
SLC6A12P48065 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.66□□□□□ -0.06
SLC6A12P48065 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC6A12P48065 CRB3P1-201ENST00000449338 276 ntBASIC14.66□□□□□ -0.06
SLC6A12P48065 GIMAP3P-201ENST00000495150 836 ntBASIC14.66□□□□□ -0.06
SLC6A12P48065 AC026434.2-201ENST00000506094 1078 ntBASIC14.66□□□□□ -0.06
SLC6A12P48065 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
SLC6A12P48065 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC6A12P48065 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms