Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.59■□□□□ 0.25
HTTP42858 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.59■□□□□ 0.25
HTTP42858 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 RPL35P9-201ENST00000446059 350 ntBASIC16.59■□□□□ 0.25
HTTP42858 AC114947.1-202ENST00000514136 344 ntBASIC16.59■□□□□ 0.25
HTTP42858 RNA5SP417-201ENST00000516459 108 ntBASIC16.59■□□□□ 0.25
HTTP42858 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 AP005212.2-201ENST00000584979 510 ntBASIC16.59■□□□□ 0.25
HTTP42858 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 KRT18P46-201ENST00000435568 1279 ntBASIC16.59■□□□□ 0.25
HTTP42858 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.59■□□□□ 0.25
HTTP42858 AC053503.3-201ENST00000448375 114 ntBASIC16.59■□□□□ 0.25
HTTP42858 AC113347.2-201ENST00000512350 279 ntBASIC16.59■□□□□ 0.25
HTTP42858 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.59■□□□□ 0.25
HTTP42858 AC011462.4-201ENST00000616866 449 ntBASIC16.59■□□□□ 0.25
HTTP42858 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.59■□□□□ 0.25
HTTP42858 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HTTP42858 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.58■□□□□ 0.25
HTTP42858 AC090616.6-203ENST00000579186 1945 ntBASIC16.58■□□□□ 0.25
HTTP42858 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.58■□□□□ 0.25
HTTP42858 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTTP42858 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
HTTP42858 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.58■□□□□ 0.25
HTTP42858 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTTP42858 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTTP42858 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.58■□□□□ 0.24
HTTP42858 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HTTP42858 AC108734.2-201ENST00000420887 1069 ntBASIC16.58■□□□□ 0.24
HTTP42858 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.58■□□□□ 0.24
HTTP42858 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.58■□□□□ 0.24
HTTP42858 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.58■□□□□ 0.24
HTTP42858 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HTTP42858 AC018846.1-201ENST00000568231 183 ntBASIC16.58■□□□□ 0.24
HTTP42858 AP005264.6-204ENST00000588436 719 ntBASIC16.58■□□□□ 0.24
HTTP42858 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
HTTP42858 LINC00528-201ENST00000600723 2160 ntBASIC16.58■□□□□ 0.24
HTTP42858 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.58■□□□□ 0.24
HTTP42858 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTTP42858 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.57■□□□□ 0.24
HTTP42858 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.57■□□□□ 0.24
HTTP42858 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HTTP42858 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.57■□□□□ 0.24
HTTP42858 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.57■□□□□ 0.24
HTTP42858 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 CTBP2P8-201ENST00000422584 1330 ntBASIC16.57■□□□□ 0.24
HTTP42858 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms