Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 VDAC1P7-201ENST00000462417 847 ntBASIC15.47■□□□□ 0.07
GRIA1P42261 AC026410.3-201ENST00000514280 936 ntBASIC15.47■□□□□ 0.07
GRIA1P42261 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
GRIA1P42261 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.47■□□□□ 0.07
GRIA1P42261 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.47■□□□□ 0.07
GRIA1P42261 TPRX2P-201ENST00000535362 881 ntBASIC15.47■□□□□ 0.07
GRIA1P42261 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.47■□□□□ 0.07
GRIA1P42261 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
GRIA1P42261 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
GRIA1P42261 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GRIA1P42261 AL158070.2-201ENST00000623713 1621 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 AL137783.1-201ENST00000623494 1896 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.46■□□□□ 0.07
GRIA1P42261 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.46■□□□□ 0.07
GRIA1P42261 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 BASP1P1-201ENST00000430708 665 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.46■□□□□ 0.07
GRIA1P42261 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.46■□□□□ 0.07
GRIA1P42261 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 AC036164.1-201ENST00000570544 333 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 AL049840.4-201ENST00000602422 811 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 GPALPP1-207ENST00000611650 899 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.46■□□□□ 0.07
GRIA1P42261 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 AL138799.1-201ENST00000448213 1675 ntBASIC15.46■□□□□ 0.07
GRIA1P42261 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.46■□□□□ 0.07
GRIA1P42261 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.46■□□□□ 0.07
GRIA1P42261 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GRIA1P42261 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
GRIA1P42261 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GRIA1P42261 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GRIA1P42261 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GRIA1P42261 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GRIA1P42261 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.46■□□□□ 0.06
GRIA1P42261 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GRIA1P42261 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
GRIA1P42261 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.45■□□□□ 0.06
GRIA1P42261 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GRIA1P42261 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GRIA1P42261 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GRIA1P42261 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.45■□□□□ 0.06
GRIA1P42261 PMS2P2-201ENST00000425039 1128 ntBASIC15.45■□□□□ 0.06
GRIA1P42261 AL353779.1-201ENST00000434793 351 ntBASIC15.45■□□□□ 0.06
GRIA1P42261 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.45■□□□□ 0.06
GRIA1P42261 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.45■□□□□ 0.06
GRIA1P42261 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GRIA1P42261 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
GRIA1P42261 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms