Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.18□□□□□ -0.14
LCN1P31025 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LCN1P31025 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.18□□□□□ -0.14
LCN1P31025 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCN1P31025 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LCN1P31025 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.18□□□□□ -0.14
LCN1P31025 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.17□□□□□ -0.14
LCN1P31025 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 AC002472.2-201ENST00000442739 958 ntBASIC14.17□□□□□ -0.14
LCN1P31025 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.17□□□□□ -0.14
LCN1P31025 AC092552.1-201ENST00000547243 906 ntBASIC14.17□□□□□ -0.14
LCN1P31025 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.17□□□□□ -0.14
LCN1P31025 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.17□□□□□ -0.14
LCN1P31025 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.17□□□□□ -0.14
LCN1P31025 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 AC007292.2-201ENST00000593524 1812 ntBASIC14.17□□□□□ -0.14
LCN1P31025 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 AC007541.1-201ENST00000570282 1469 ntBASIC14.17□□□□□ -0.14
LCN1P31025 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 INTS4P2-202ENST00000614726 2019 ntBASIC14.17□□□□□ -0.14
LCN1P31025 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LCN1P31025 AL138799.1-201ENST00000448213 1675 ntBASIC14.17□□□□□ -0.14
LCN1P31025 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LCN1P31025 AC139749.1-202ENST00000617529 3139 ntBASIC14.17□□□□□ -0.14
LCN1P31025 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LCN1P31025 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.17□□□□□ -0.14
LCN1P31025 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LCN1P31025 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LCN1P31025 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LCN1P31025 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LCN1P31025 AC093525.8-201ENST00000624099 1342 ntBASIC14.16□□□□□ -0.14
LCN1P31025 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LCN1P31025 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms