Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.83□□□□□ -0.2
GDF1P27539 AC132938.4-201ENST00000623835 848 ntBASIC13.83□□□□□ -0.2
GDF1P27539 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.83□□□□□ -0.2
GDF1P27539 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
GDF1P27539 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GDF1P27539 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.83□□□□□ -0.2
GDF1P27539 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.83□□□□□ -0.2
GDF1P27539 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.83□□□□□ -0.2
GDF1P27539 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
GDF1P27539 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
GDF1P27539 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.83□□□□□ -0.2
GDF1P27539 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 C18orf15-201ENST00000623680 2534 ntBASIC13.83□□□□□ -0.2
GDF1P27539 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GDF1P27539 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.83□□□□□ -0.2
GDF1P27539 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
GDF1P27539 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.82□□□□□ -0.2
GDF1P27539 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 AC104457.1-201ENST00000401024 814 ntBASIC13.82□□□□□ -0.2
GDF1P27539 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.82□□□□□ -0.2
GDF1P27539 CNN2P8-201ENST00000421872 913 ntBASIC13.82□□□□□ -0.2
GDF1P27539 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
GDF1P27539 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 YBX1P6-201ENST00000442962 1002 ntBASIC13.82□□□□□ -0.2
GDF1P27539 AL590640.2-201ENST00000457038 527 ntBASIC13.82□□□□□ -0.2
GDF1P27539 RNA5SP486-201ENST00000515961 83 ntBASIC13.82□□□□□ -0.2
GDF1P27539 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.82□□□□□ -0.2
GDF1P27539 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.82□□□□□ -0.2
GDF1P27539 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.82□□□□□ -0.2
GDF1P27539 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.82□□□□□ -0.2
GDF1P27539 AC078819.1-201ENST00000547454 765 ntBASIC13.82□□□□□ -0.2
GDF1P27539 AC012085.1-201ENST00000548270 765 ntBASIC13.82□□□□□ -0.2
GDF1P27539 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.82□□□□□ -0.2
GDF1P27539 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.82□□□□□ -0.2
GDF1P27539 ECM1P1-201ENST00000604092 1279 ntBASIC13.82□□□□□ -0.2
GDF1P27539 REXO1L5P-201ENST00000622260 2098 ntBASIC13.82□□□□□ -0.2
GDF1P27539 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.82□□□□□ -0.2
GDF1P27539 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.82□□□□□ -0.2
GDF1P27539 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GDF1P27539 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.82□□□□□ -0.2
GDF1P27539 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
GDF1P27539 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
GDF1P27539 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 AC012508.2-201ENST00000567613 1472 ntBASIC13.81□□□□□ -0.2
GDF1P27539 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms