Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN2P17655 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN2P17655 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN2P17655 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN2P17655 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN2P17655 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN2P17655 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN2P17655 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.65■□□□□ 0.42
CAPN2P17655 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN2P17655 AC074338.1-201ENST00000416825 156 ntBASIC17.65■□□□□ 0.42
CAPN2P17655 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.65■□□□□ 0.42
CAPN2P17655 FTLP1-201ENST00000449155 526 ntBASIC17.65■□□□□ 0.42
CAPN2P17655 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN2P17655 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.65■□□□□ 0.42
CAPN2P17655 AL353726.2-201ENST00000623259 884 ntBASIC17.65■□□□□ 0.42
CAPN2P17655 CU633904.3-201ENST00000624042 1029 ntBASIC17.65■□□□□ 0.42
CAPN2P17655 AC006453.4-201ENST00000636949 1252 ntBASIC17.65■□□□□ 0.42
CAPN2P17655 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN2P17655 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CAPN2P17655 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN2P17655 AC139749.1-202ENST00000617529 3139 ntBASIC17.65■□□□□ 0.42
CAPN2P17655 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.65■□□□□ 0.42
CAPN2P17655 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN2P17655 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN2P17655 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN2P17655 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.64■□□□□ 0.42
CAPN2P17655 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.64■□□□□ 0.42
CAPN2P17655 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
CAPN2P17655 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN2P17655 MIR769-201ENST00000390225 118 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CAPN2P17655 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN2P17655 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 AZGP1P1-201ENST00000411909 902 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN2P17655 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN2P17655 AL133466.1-201ENST00000447582 150 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN2P17655 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 RPSAP36-202ENST00000494591 1261 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 RNA5SP486-201ENST00000515961 83 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN2P17655 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN2P17655 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN2P17655 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN2P17655 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN2P17655 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN2P17655 AC126755.1-201ENST00000525846 6405 ntBASIC17.64■□□□□ 0.41
CAPN2P17655 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN2P17655 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN2P17655 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms