Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPL17P45-201ENST00000586289 509 ntBASIC16.92■□□□□ 0.3
COL11A1P12107 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
COL11A1P12107 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.92■□□□□ 0.3
COL11A1P12107 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COL11A1P12107 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
COL11A1P12107 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL11A1P12107 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
COL11A1P12107 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL11A1P12107 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.92■□□□□ 0.3
COL11A1P12107 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 XBP1P1-201ENST00000436573 652 ntBASIC16.91■□□□□ 0.3
COL11A1P12107 AC012441.2-201ENST00000444843 739 ntBASIC16.91■□□□□ 0.3
COL11A1P12107 AC006335.1-201ENST00000445200 547 ntBASIC16.91■□□□□ 0.3
COL11A1P12107 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL11A1P12107 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.91■□□□□ 0.3
COL11A1P12107 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.91■□□□□ 0.3
COL11A1P12107 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.91■□□□□ 0.3
COL11A1P12107 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 LINC01101-201ENST00000622953 1884 ntBASIC16.91■□□□□ 0.3
COL11A1P12107 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.91■□□□□ 0.3
COL11A1P12107 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL11A1P12107 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.91■□□□□ 0.3
COL11A1P12107 IQSEC3P1-201ENST00000538799 536 ntBASIC16.91■□□□□ 0.3
COL11A1P12107 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.91■□□□□ 0.3
COL11A1P12107 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 AP003419.4-201ENST00000616071 517 ntBASIC16.91■□□□□ 0.3
COL11A1P12107 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL11A1P12107 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL11A1P12107 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL11A1P12107 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 ACE3P-201ENST00000423435 1973 ntBASIC16.9■□□□□ 0.3
COL11A1P12107 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.9■□□□□ 0.3
COL11A1P12107 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.9■□□□□ 0.3
COL11A1P12107 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.9■□□□□ 0.3
COL11A1P12107 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COL11A1P12107 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.9■□□□□ 0.3
COL11A1P12107 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.9■□□□□ 0.3
COL11A1P12107 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.9■□□□□ 0.3
COL11A1P12107 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.9■□□□□ 0.3
COL11A1P12107 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.9■□□□□ 0.3
COL11A1P12107 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL11A1P12107 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms