Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL137784.3-201ENST00000623858 2288 ntBASIC16.03■□□□□ 0.16
RARAP10276 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.02■□□□□ 0.16
RARAP10276 AC117489.1-201ENST00000625169 3217 ntBASIC16.02■□□□□ 0.16
RARAP10276 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RARAP10276 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RARAP10276 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RARAP10276 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.02■□□□□ 0.16
RARAP10276 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RARAP10276 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.02■□□□□ 0.16
RARAP10276 GNAQP1-201ENST00000444815 1067 ntBASIC16.02■□□□□ 0.16
RARAP10276 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.02■□□□□ 0.16
RARAP10276 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.02■□□□□ 0.16
RARAP10276 TPRX2P-201ENST00000535362 881 ntBASIC16.02■□□□□ 0.16
RARAP10276 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RARAP10276 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.02■□□□□ 0.16
RARAP10276 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.02■□□□□ 0.16
RARAP10276 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.02■□□□□ 0.16
RARAP10276 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.02■□□□□ 0.16
RARAP10276 AC097359.2-201ENST00000604992 2389 ntBASIC16.02■□□□□ 0.15
RARAP10276 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.02■□□□□ 0.15
RARAP10276 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RARAP10276 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RARAP10276 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RARAP10276 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RARAP10276 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.01■□□□□ 0.15
RARAP10276 FAM86LP-201ENST00000478302 853 ntBASIC16.01■□□□□ 0.15
RARAP10276 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.01■□□□□ 0.15
RARAP10276 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 SAMD11P1-201ENST00000571429 661 ntBASIC16.01■□□□□ 0.15
RARAP10276 AC027796.2-201ENST00000575326 344 ntBASIC16.01■□□□□ 0.15
RARAP10276 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RARAP10276 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RARAP10276 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RARAP10276 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RARAP10276 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.01■□□□□ 0.15
RARAP10276 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16■□□□□ 0.15
RARAP10276 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16■□□□□ 0.15
RARAP10276 BX640514.1-201ENST00000583223 1918 ntBASIC16■□□□□ 0.15
RARAP10276 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RARAP10276 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 AC018442.1-201ENST00000421439 2061 ntBASIC16■□□□□ 0.15
RARAP10276 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RARAP10276 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16■□□□□ 0.15
RARAP10276 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 RN7SL399P-201ENST00000471648 279 ntBASIC16■□□□□ 0.15
RARAP10276 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 INGX-202ENST00000489074 768 ntBASIC16■□□□□ 0.15
RARAP10276 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16■□□□□ 0.15
RARAP10276 RNA5SP421-201ENST00000516864 134 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms