Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.83□□□□□ -0.03
CCNYL3P0C7X3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC005229.1-201ENST00000392885 409 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 BCRP2-202ENST00000447763 634 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 KRT18P43-201ENST00000469825 1281 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 BCRP6-201ENST00000510112 632 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 BCRP7-201ENST00000511549 544 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC120045.2-201ENST00000567334 178 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 MIR4259-201ENST00000584466 101 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC121493.1-201ENST00000602316 450 ntBASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL3P0C7X3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 VDAC1P7-201ENST00000462417 847 ntBASIC14.82□□□□□ -0.04
CCNYL3P0C7X3 AC068587.3-201ENST00000526613 355 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms