Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 AC016397.2-201ENST00000624848 1985 ntBASIC12.28□□□□□ -0.44
SFTA3P0C7M3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 MIR497HG-202ENST00000572453 3838 ntBASIC12.28□□□□□ -0.44
SFTA3P0C7M3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SFTA3P0C7M3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
SFTA3P0C7M3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 SPDYE21P-201ENST00000413323 827 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 ABCD1P5-201ENST00000445663 754 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 AC132008.2-207ENST00000454517 770 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 MIR3652-201ENST00000579335 131 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 AL353135.1-201ENST00000606729 504 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 FAM90A12P-201ENST00000519497 2375 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 FAM90A24P-201ENST00000520792 2369 ntBASIC12.27□□□□□ -0.45
SFTA3P0C7M3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SFTA3P0C7M3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 KRT16P4-201ENST00000453883 522 ntBASIC12.26□□□□□ -0.45
SFTA3P0C7M3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SFTA3P0C7M3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms