Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.33■□□□□ 0.04
APODP05090 AC138627.1-207ENST00000641560 1006 ntBASIC15.33■□□□□ 0.04
APODP05090 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.33■□□□□ 0.04
APODP05090 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 PKD1P5-201ENST00000532415 10291 ntBASIC15.33■□□□□ 0.04
APODP05090 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
APODP05090 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 AC090616.6-203ENST00000579186 1945 ntBASIC15.33■□□□□ 0.04
APODP05090 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APODP05090 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.33■□□□□ 0.04
APODP05090 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.33■□□□□ 0.04
APODP05090 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
APODP05090 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
APODP05090 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APODP05090 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
APODP05090 AL391005.1-201ENST00000623953 2435 ntBASIC15.32■□□□□ 0.04
APODP05090 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.32■□□□□ 0.04
APODP05090 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.32■□□□□ 0.04
APODP05090 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.32■□□□□ 0.04
APODP05090 CYP46A4P-201ENST00000414953 267 ntBASIC15.32■□□□□ 0.04
APODP05090 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.32■□□□□ 0.04
APODP05090 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 UPF3AP2-201ENST00000457924 1132 ntBASIC15.32■□□□□ 0.04
APODP05090 TUBB8P8-201ENST00000458717 1058 ntBASIC15.32■□□□□ 0.04
APODP05090 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.32■□□□□ 0.04
APODP05090 RNA5SP423-201ENST00000517127 109 ntBASIC15.32■□□□□ 0.04
APODP05090 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.32■□□□□ 0.04
APODP05090 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.32■□□□□ 0.04
APODP05090 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.32■□□□□ 0.04
APODP05090 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.32■□□□□ 0.04
APODP05090 AC091544.8-201ENST00000619490 361 ntBASIC15.32■□□□□ 0.04
APODP05090 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
APODP05090 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.32■□□□□ 0.04
APODP05090 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.32■□□□□ 0.04
APODP05090 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.32■□□□□ 0.04
APODP05090 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.32■□□□□ 0.04
APODP05090 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
APODP05090 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
APODP05090 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APODP05090 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 AC092850.2-201ENST00000623821 2697 ntBASIC15.31■□□□□ 0.04
APODP05090 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.31■□□□□ 0.04
APODP05090 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
APODP05090 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
APODP05090 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.31■□□□□ 0.04
APODP05090 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.31■□□□□ 0.04
APODP05090 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.31■□□□□ 0.04
APODP05090 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
APODP05090 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.31■□□□□ 0.04
APODP05090 AC011742.3-201ENST00000439053 820 ntBASIC15.31■□□□□ 0.04
APODP05090 RNMTL1P1-201ENST00000454103 560 ntBASIC15.31■□□□□ 0.04
APODP05090 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
APODP05090 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.31■□□□□ 0.04
APODP05090 AC100827.2-201ENST00000563214 1194 ntBASIC15.31■□□□□ 0.04
APODP05090 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.31■□□□□ 0.04
APODP05090 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 MIR3619-201ENST00000579667 83 ntBASIC15.31■□□□□ 0.04
APODP05090 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APODP05090 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.31■□□□□ 0.04
APODP05090 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.31■□□□□ 0.04
APODP05090 AL358472.3-201ENST00000608147 415 ntBASIC15.31■□□□□ 0.04
APODP05090 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.31■□□□□ 0.04
APODP05090 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms