Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 WASH3P-207ENST00000560956 1394 ntBASIC18.25■□□□□ 0.51
CHGBP05060 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHGBP05060 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.25■□□□□ 0.51
CHGBP05060 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 CLUHP2-201ENST00000426660 1303 ntBASIC18.24■□□□□ 0.51
CHGBP05060 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 AC009093.2-202ENST00000620513 2079 ntBASIC18.24■□□□□ 0.51
CHGBP05060 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 AC106881.1-201ENST00000605849 3329 ntBASIC18.24■□□□□ 0.51
CHGBP05060 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 HLA-V-201ENST00000429037 534 ntBASIC18.24■□□□□ 0.51
CHGBP05060 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.24■□□□□ 0.51
CHGBP05060 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.24■□□□□ 0.51
CHGBP05060 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHGBP05060 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHGBP05060 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHGBP05060 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CHGBP05060 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHGBP05060 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.23■□□□□ 0.51
CHGBP05060 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 KRT43P-201ENST00000434019 910 ntBASIC18.23■□□□□ 0.51
CHGBP05060 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.23■□□□□ 0.51
CHGBP05060 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.23■□□□□ 0.51
CHGBP05060 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.23■□□□□ 0.51
CHGBP05060 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.23■□□□□ 0.51
CHGBP05060 AC138951.2-201ENST00000623455 1161 ntBASIC18.23■□□□□ 0.51
CHGBP05060 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.23■□□□□ 0.51
CHGBP05060 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.23■□□□□ 0.51
CHGBP05060 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.23■□□□□ 0.51
CHGBP05060 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHGBP05060 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHGBP05060 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHGBP05060 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHGBP05060 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CHGBP05060 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CHGBP05060 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms