Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC007389.4-201ENST00000454674 793 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 KRT18P25-201ENST00000508931 1278 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 AC068587.3-201ENST00000526613 355 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PTP4A1P2-201ENST00000546033 454 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 KRT8P35-201ENST00000483942 1338 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 TMEM14DP-201ENST00000422205 345 ntBASIC16.37■□□□□ 0.21
HLA-DRAP01903 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC022616.1-201ENST00000518688 554 ntBASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC005225.4-201ENST00000557330 545 ntBASIC16.37■□□□□ 0.21
HLA-DRAP01903 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 DUX4L47-201ENST00000566374 394 ntBASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 AC134312.5-201ENST00000568031 1313 ntBASIC16.37■□□□□ 0.21
HLA-DRAP01903 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRAP01903 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DRAP01903 FLJ16779-201ENST00000612722 7638 ntBASIC16.37■□□□□ 0.21
HLA-DRAP01903 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 LRRC59-203ENST00000576448 1531 ntBASIC16.36■□□□□ 0.21
HLA-DRAP01903 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms