Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.85□□□□□ -0.03
LDLRP01130 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.85□□□□□ -0.03
LDLRP01130 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.85□□□□□ -0.03
LDLRP01130 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.85□□□□□ -0.03
LDLRP01130 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.85□□□□□ -0.03
LDLRP01130 AC003101.2-201ENST00000612557 442 ntBASIC14.85□□□□□ -0.03
LDLRP01130 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.85□□□□□ -0.03
LDLRP01130 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.85□□□□□ -0.03
LDLRP01130 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LDLRP01130 AL589702.1-201ENST00000641229 1509 ntBASIC14.85□□□□□ -0.03
LDLRP01130 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.85□□□□□ -0.03
LDLRP01130 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LDLRP01130 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.85□□□□□ -0.03
LDLRP01130 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LDLRP01130 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LDLRP01130 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LDLRP01130 AC140479.7-201ENST00000636301 2332 ntBASIC14.84□□□□□ -0.03
LDLRP01130 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LDLRP01130 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.84□□□□□ -0.03
LDLRP01130 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
LDLRP01130 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.84□□□□□ -0.03
LDLRP01130 MIR4313-201ENST00000580760 101 ntBASIC14.84□□□□□ -0.03
LDLRP01130 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 AC084346.2-201ENST00000607097 949 ntBASIC14.84□□□□□ -0.03
LDLRP01130 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.84□□□□□ -0.03
LDLRP01130 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LDLRP01130 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 AC018892.3-201ENST00000623986 2499 ntBASIC14.84□□□□□ -0.03
LDLRP01130 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LDLRP01130 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LDLRP01130 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LDLRP01130 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LDLRP01130 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.83□□□□□ -0.03
LDLRP01130 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LDLRP01130 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.83□□□□□ -0.03
LDLRP01130 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LDLRP01130 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
LDLRP01130 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LDLRP01130 AL512384.1-201ENST00000406683 331 ntBASIC14.83□□□□□ -0.04
LDLRP01130 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms