Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.11■□□□□ 0.33
ALDH1A1P00352 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 AL157414.3-201ENST00000624276 1954 ntBASIC17.11■□□□□ 0.33
ALDH1A1P00352 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 LINC01815-202ENST00000641468 1409 ntBASIC17.11■□□□□ 0.33
ALDH1A1P00352 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AL137783.1-201ENST00000623494 1896 ntBASIC17.1■□□□□ 0.33
ALDH1A1P00352 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AC084752.1-201ENST00000509766 622 ntBASIC17.1■□□□□ 0.33
ALDH1A1P00352 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AP000911.2-201ENST00000534330 502 ntBASIC17.1■□□□□ 0.33
ALDH1A1P00352 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AC027237.1-201ENST00000560942 655 ntBASIC17.1■□□□□ 0.33
ALDH1A1P00352 MIR3180-2-201ENST00000581748 88 ntBASIC17.1■□□□□ 0.33
ALDH1A1P00352 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALDH1A1P00352 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALDH1A1P00352 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AL357563.1-201ENST00000404728 395 ntBASIC17.09■□□□□ 0.33
ALDH1A1P00352 XBP1P1-201ENST00000436573 652 ntBASIC17.09■□□□□ 0.33
ALDH1A1P00352 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 CICP12-201ENST00000455801 843 ntBASIC17.09■□□□□ 0.33
ALDH1A1P00352 MRPL22P1-201ENST00000505398 616 ntBASIC17.09■□□□□ 0.33
ALDH1A1P00352 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AC084781.1-201ENST00000613737 656 ntBASIC17.09■□□□□ 0.33
ALDH1A1P00352 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AL596087.1-201ENST00000400979 1969 ntBASIC17.09■□□□□ 0.33
ALDH1A1P00352 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALDH1A1P00352 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ALDH1A1P00352 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALDH1A1P00352 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ALDH1A1P00352 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALDH1A1P00352 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms