Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SNX4O95219 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 AC015922.1-201ENST00000421102 1152 ntBASIC14.44□□□□□ -0.1
SNX4O95219 CRB3P1-201ENST00000449338 276 ntBASIC14.44□□□□□ -0.1
SNX4O95219 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.44□□□□□ -0.1
SNX4O95219 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 AC055876.2-201ENST00000531834 546 ntBASIC14.44□□□□□ -0.1
SNX4O95219 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SNX4O95219 RRP7BP-205ENST00000566851 833 ntBASIC14.44□□□□□ -0.1
SNX4O95219 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.44□□□□□ -0.1
SNX4O95219 AL132655.2-201ENST00000596276 594 ntBASIC14.44□□□□□ -0.1
SNX4O95219 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNX4O95219 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX4O95219 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 AL359183.1-201ENST00000623796 2132 ntBASIC14.44□□□□□ -0.1
SNX4O95219 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.43□□□□□ -0.1
SNX4O95219 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.43□□□□□ -0.1
SNX4O95219 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 AL035633.1-201ENST00000406139 838 ntBASIC14.43□□□□□ -0.1
SNX4O95219 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.43□□□□□ -0.1
SNX4O95219 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.43□□□□□ -0.1
SNX4O95219 GNAQP1-201ENST00000444815 1067 ntBASIC14.43□□□□□ -0.1
SNX4O95219 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.43□□□□□ -0.1
SNX4O95219 SPDYE18-201ENST00000510091 1050 ntBASIC14.43□□□□□ -0.1
SNX4O95219 SLED1-202ENST00000512051 380 ntBASIC14.43□□□□□ -0.1
SNX4O95219 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.43□□□□□ -0.1
SNX4O95219 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.43□□□□□ -0.1
SNX4O95219 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 AC097359.3-201ENST00000603982 1210 ntBASIC14.43□□□□□ -0.1
SNX4O95219 AC099568.2-201ENST00000609194 695 ntBASIC14.43□□□□□ -0.1
SNX4O95219 AL358472.5-202ENST00000641448 1267 ntBASIC14.43□□□□□ -0.1
SNX4O95219 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms