Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 CTNS-203ENST00000399306 803 ntTSL 3 BASIC10.31□□□□□ -0.76
SNCGO76070 MIR1238-201ENST00000408483 83 ntBASIC10.31□□□□□ -0.76
SNCGO76070 APTR-205ENST00000447009 902 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC10.31□□□□□ -0.76
SNCGO76070 GCSHP2-201ENST00000560971 527 ntBASIC10.31□□□□□ -0.76
SNCGO76070 MPDU1-223ENST00000582151 728 ntBASIC10.31□□□□□ -0.76
SNCGO76070 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC10.31□□□□□ -0.76
SNCGO76070 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC10.31□□□□□ -0.76
SNCGO76070 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SNCGO76070 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 AC015818.9-201ENST00000591705 4582 ntBASIC10.31□□□□□ -0.76
SNCGO76070 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC10.31□□□□□ -0.76
SNCGO76070 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SNCGO76070 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.31□□□□□ -0.76
SNCGO76070 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.31□□□□□ -0.76
SNCGO76070 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.31□□□□□ -0.76
SNCGO76070 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SNCGO76070 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
SNCGO76070 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 AC132938.5-201ENST00000624980 1813 ntBASIC10.3□□□□□ -0.76
SNCGO76070 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.3□□□□□ -0.76
SNCGO76070 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 AC126365.1-201ENST00000578585 1514 ntBASIC10.3□□□□□ -0.76
SNCGO76070 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 PRR31-201ENST00000371629 978 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC10.3□□□□□ -0.76
SNCGO76070 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SNCGO76070 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 CDK2AP2P3-201ENST00000422476 372 ntBASIC10.3□□□□□ -0.76
SNCGO76070 ECEL1P3-201ENST00000427961 737 ntBASIC10.3□□□□□ -0.76
SNCGO76070 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC10.3□□□□□ -0.76
SNCGO76070 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.3□□□□□ -0.76
SNCGO76070 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC10.3□□□□□ -0.76
SNCGO76070 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC10.3□□□□□ -0.76
SNCGO76070 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 MMD2-204ENST00000612910 778 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 CLN6-221ENST00000637494 765 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms