Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 C2orf27AP3-201ENST00000434123 579 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 AC016694.1-201ENST00000434179 700 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 CROCCP4-201ENST00000457096 498 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 AC007551.1-201ENST00000457394 519 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 AL354718.3-201ENST00000616414 581 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 CR382287.1-201ENST00000623954 586 ntBASIC15.42■□□□□ 0.06
PRAMEF11O60813 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF11O60813 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PRAMEF11O60813 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 AC023090.2-201ENST00000625182 2110 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 AC112492.5-201ENST00000421897 457 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 AC245100.3-201ENST00000441281 285 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 AC004466.1-201ENST00000599515 1080 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 AC244669.2-201ENST00000612320 853 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 ENPP7P14-201ENST00000621765 1040 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF11O60813 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEF11O60813 TSPY26P-202ENST00000565928 3884 ntBASIC15.41■□□□□ 0.06
PRAMEF11O60813 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 RAB43P1-201ENST00000561790 589 ntBASIC15.4■□□□□ 0.06
PRAMEF11O60813 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 AC239800.4-201ENST00000603712 296 ntBASIC15.4■□□□□ 0.06
PRAMEF11O60813 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 AL512343.1-201ENST00000605837 169 ntBASIC15.4■□□□□ 0.06
PRAMEF11O60813 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms