Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRICKLE3O43900 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRICKLE3O43900 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.63□□□□□ -0.07
PRICKLE3O43900 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRICKLE3O43900 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.63□□□□□ -0.07
PRICKLE3O43900 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 KRT43P-201ENST00000434019 910 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 AC016694.1-201ENST00000434179 700 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 AC026434.2-201ENST00000506094 1078 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 IGHV3-71-201ENST00000523324 359 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 RAB43P1-201ENST00000561790 589 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 RN7SL48P-201ENST00000579283 293 ntBASIC14.62□□□□□ -0.07
PRICKLE3O43900 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
PRICKLE3O43900 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRICKLE3O43900 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 AP002414.2-201ENST00000591780 3365 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 TCAF2P1-201ENST00000291129 2421 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 AC055811.4-201ENST00000624039 1754 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 POM121L8P-201ENST00000417732 1281 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 POM121L9P-203ENST00000441984 1285 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRICKLE3O43900 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 AP000812.2-201ENST00000538934 718 ntBASIC14.61□□□□□ -0.07
PRICKLE3O43900 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.61□□□□□ -0.07
PRICKLE3O43900 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms