Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ3O43525 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ3O43525 MIR3619-201ENST00000579667 83 ntBASIC19.32■□□□□ 0.68
KCNQ3O43525 AC005324.6-201ENST00000587972 613 ntBASIC19.32■□□□□ 0.68
KCNQ3O43525 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.32■□□□□ 0.68
KCNQ3O43525 AC138649.2-201ENST00000615886 705 ntBASIC19.32■□□□□ 0.68
KCNQ3O43525 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KCNQ3O43525 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KCNQ3O43525 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ3O43525 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ3O43525 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KCNQ3O43525 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ3O43525 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ3O43525 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KCNQ3O43525 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
KCNQ3O43525 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KCNQ3O43525 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KCNQ3O43525 AC138035.3-201ENST00000622706 2791 ntBASIC19.31■□□□□ 0.68
KCNQ3O43525 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.31■□□□□ 0.68
KCNQ3O43525 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KCNQ3O43525 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNQ3O43525 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNQ3O43525 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.31■□□□□ 0.68
KCNQ3O43525 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.31■□□□□ 0.68
KCNQ3O43525 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNQ3O43525 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNQ3O43525 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.31■□□□□ 0.68
KCNQ3O43525 DUX4L46-201ENST00000566845 751 ntBASIC19.31■□□□□ 0.68
KCNQ3O43525 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNQ3O43525 AC068587.8-201ENST00000641239 219 ntBASIC19.31■□□□□ 0.68
KCNQ3O43525 AC138627.1-207ENST00000641560 1006 ntBASIC19.31■□□□□ 0.68
KCNQ3O43525 AC004923.1-202ENST00000642106 209 ntBASIC19.31■□□□□ 0.68
KCNQ3O43525 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
KCNQ3O43525 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ3O43525 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KCNQ3O43525 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNQ3O43525 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNQ3O43525 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNQ3O43525 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNQ3O43525 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 RPL18P13-201ENST00000478088 569 ntBASIC19.3■□□□□ 0.68
KCNQ3O43525 IMP3P2-201ENST00000489760 475 ntBASIC19.3■□□□□ 0.68
KCNQ3O43525 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.3■□□□□ 0.68
KCNQ3O43525 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNQ3O43525 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.3■□□□□ 0.68
KCNQ3O43525 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNQ3O43525 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNQ3O43525 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNQ3O43525 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNQ3O43525 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms