Protein–RNA interactions for Protein: O00463

TRAF5, TNF receptor-associated factor 5, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5O00463 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAF5O00463 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF5O00463 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF5O00463 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAF5O00463 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF5O00463 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF5O00463 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF5O00463 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF5O00463 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF5O00463 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF5O00463 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAF5O00463 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRAF5O00463 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF5O00463 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.1■□□□□ 0.49
TRAF5O00463 MIR1227-201ENST00000408484 88 ntBASIC18.1■□□□□ 0.49
TRAF5O00463 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF5O00463 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 AL160314.3-201ENST00000556041 767 ntBASIC18.1■□□□□ 0.49
TRAF5O00463 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF5O00463 AC141586.1-203ENST00000567242 366 ntBASIC18.1■□□□□ 0.49
TRAF5O00463 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF5O00463 AC090164.2-201ENST00000611487 516 ntBASIC18.1■□□□□ 0.49
TRAF5O00463 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
TRAF5O00463 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF5O00463 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF5O00463 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF5O00463 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 AL158070.2-201ENST00000623713 1621 ntBASIC18.09■□□□□ 0.49
TRAF5O00463 KRT8P14-201ENST00000414254 1442 ntBASIC18.09■□□□□ 0.49
TRAF5O00463 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 AL136309.1-201ENST00000403917 691 ntBASIC18.09■□□□□ 0.49
TRAF5O00463 AC097065.1-201ENST00000425737 517 ntBASIC18.09■□□□□ 0.49
TRAF5O00463 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAF5O00463 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 AC007718.1-201ENST00000621078 280 ntBASIC18.09■□□□□ 0.49
TRAF5O00463 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRAF5O00463 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF5O00463 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAF5O00463 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms