Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MTHFR-210ENST00000641407 2387 ntBASIC13.46□□□□□ -0.25
NPIPB4C9JG80 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 AC022137.2-201ENST00000503482 481 ntBASIC13.46□□□□□ -0.25
NPIPB4C9JG80 KRT18P25-201ENST00000508931 1278 ntBASIC13.46□□□□□ -0.25
NPIPB4C9JG80 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 AC009486.1-201ENST00000569860 813 ntBASIC13.46□□□□□ -0.25
NPIPB4C9JG80 RN7SL204P-201ENST00000582831 262 ntBASIC13.46□□□□□ -0.25
NPIPB4C9JG80 CHCHD2P3-201ENST00000603038 451 ntBASIC13.46□□□□□ -0.25
NPIPB4C9JG80 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPB4C9JG80 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 AC007191.1-201ENST00000623179 2995 ntBASIC13.46□□□□□ -0.26
NPIPB4C9JG80 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.46□□□□□ -0.26
NPIPB4C9JG80 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 MIR661-201ENST00000384842 89 ntBASIC13.45□□□□□ -0.26
NPIPB4C9JG80 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 AC002472.2-201ENST00000442739 958 ntBASIC13.45□□□□□ -0.26
NPIPB4C9JG80 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPB4C9JG80 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms