Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC007787.1-201ENST00000588095 1583 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 DRD5P1-201ENST00000456605 1438 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 AC004066.1-201ENST00000502488 802 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 RARRES2P5-201ENST00000564013 466 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 AC005498.2-205ENST00000593218 784 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 INTS4P1-203ENST00000641008 3683 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC018442.1-201ENST00000421439 2061 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 FAM86LP-201ENST00000478302 853 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 DOC2GP-202ENST00000514950 1163 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC023310.3-201ENST00000557027 670 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC100756.1-201ENST00000562736 682 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC138749.3-201ENST00000567691 622 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 AC116165.1-201ENST00000611806 668 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 AL662799.1-202ENST00000614205 422 ntBASIC12.3□□□□□ -0.44
SRRM4A7MD48 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms