Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 KRT8P13-201ENST00000463294 1010 ntBASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AC126755.1-201ENST00000525846 6405 ntBASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 POM121L8P-201ENST00000417732 1281 ntBASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 POM121L9P-203ENST00000441984 1285 ntBASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 AL157414.3-201ENST00000624276 1954 ntBASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3FA6NER0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AC008741.2-201ENST00000612792 3115 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AC104457.1-201ENST00000401024 814 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms